ADASTRA v6.1.0
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rs282135
chr6:89242511
G
>
T
Sequence
tgccctagtggcttttgtgatcaa[G/T]agacacaaactcattttggaagca
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines)
2588 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
1.99
-1.20
2.2·10
-5
1.00
1.07
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
nicotine dependence (smoking)
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)