rs2822754 chr21:14534269 G>A
- Sequence
tatactatcaatgttttcagtggt[G/A]gccaaagtgttataaaaagcacac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) Th1-cells EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- FOXK2_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.57 | -4.57 | 1.50 | n/a | No Hit | |||
| TBX21_HUMAN | 1.21 | -0.81 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP eye color, salmonella-induced pyroptosis, total cholesterol change with statins, transmission distortion