rs2822835 chr21:14686654 G>A
- Sequence
gttatagacagacgtgcgaaagaa[G/A]gtgtttaagaagtgttgcaacttt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -0.01 | 1.15 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, hdl cholesterol, microalbuminuria, neuroblastoma (brain cancer), parkinsons disease, primary rhegmatogenous retinal detachment, total cholesterol change with statins