rs282335 chr5:71680559 G>A

Sequence
actgagactgagatgacagcagat[G/A]tggtggtagaaatatgagcaagaa
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ESR1_HUMAN PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.03 1.56 1.002.3·10-32 2.58 n/a No Hit
PKNX1_HUMAN n/a 2.62 1.000.03 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP bipolar disorder irritible bowel syndrome obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Cells_Cultured_fibroblasts Testis

Download