ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs282335
chr5:71680559
G
>
A
Sequence
actgagactgagatgacagcagat[G/A]tggtggtagaaatatgagcaagaa
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ESR1_HUMAN
PKNX1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN
0.03
1.56
1.00
2.3·10
-32
2.58
n/a
No Hit
PKNX1_HUMAN
n/a
2.62
1.00
0.03
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
irritible bowel syndrome
,
obesity with early age of onset (age >2)
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Testis
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)