rs2823479 chr21:15769862 T>A
- Sequence
taagagggatttgggtaggtaatt[T/A]taacacagaaagtaatgccacata
- ASB in cell types
- LNCaP95
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.03 | 1.19 | 1.60 | 1.00 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP hdl cholesterol, lung function, forced expiratory volume in 1 second (fev1) percent predicted (in asthmatic participants)