rs2823602 chr21:16079956 T>G
- Sequence
cagtaatagataattttgttgata[T/G]gtgttagacatgcaatgagtaatt
- ASB for transcription factors
- PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 1.12 | n/a | 3.00 | 2.09 | Discordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, bipolar disorder, body mass index (bmi), hdl cholesterol change with statins, triglycerides