rs2824417 chr21:17650512 G>A
- Sequence
actggccttgacctttgcagtttt[G/A]taaacatgttttttccctggcttt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA3_HUMAN NR2F6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA3_HUMAN | 2.50 | -4.41 | 1.50 | -2.94 | Concordant | |||
| NR2F6_HUMAN | 1.63 | -1.31 | 1.50 | n/a | No Hit |
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Motif analysis
