ADASTRA v6.1.0
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rs282571
chr13:112711920
C
>
G
Sequence
tttctggagcacatagataaggag[C/G]gggtggaggggagaggccttagtt
ASB in cell types
BEAS-2B (bronchial epithelium)
HEK293 (embryonic kidney)
iPS-derived chondrocytes
ASB for transcription factors
GCR_HUMAN
RARA_HUMAN
ZF64B_HUMAN
SP7_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN
0.15
1.32
1.00
2.5·10
-6
1.11
n/a
No Hit
RARA_HUMAN
0.63
1.46
0.98
1.7·10
-3
1.00
n/a
No Hit
ZF64B_HUMAN
3.01
n/a
5.2·10
-3
1.00
2.00
n/a
No Hit
SP7_HUMAN
1.75
n/a
0.05
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Liver
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)