rs28544952 chr1:1919475 A>G
- Sequence
aaccccgccctccgggcaccgccc[A/G]gagcaaaccgcgttcgtcgcaggc
- ASB in cell types
- thymus-derived CD34- cells 22RV1 (prostate carcinoma) CD14+ monocytes monocytes from periferal blood
- ASB for transcription factors
- BC11B_HUMAN ANDR_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BC11B_HUMAN | 2.74 | -1.33 | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.72 | -1.82 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.43 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Colon_Transverse, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Stomach