ADASTRA v6.1.0
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rs288087
chr2:209556735
G
>
A
Sequence
tggaaggaaatatcttaactagag[G/A]taatctgacataaaaccattgtag
ASB in cell types
GM19193 (female B-cells Lymphoblastoid Cell Lines)
pancreas
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM19193 (female B-cells Lymphoblastoid Cell Lines)
0.33
2.08
1.00
0.03
1.00
pancreas
2.06
n/a
0.04
1.00
1.00
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5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
refractive error
,
triglycerides change with statins
,
waist hip ratio
GTEx eQTL
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Muscle_Skeletal
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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