ADASTRA v6.1.0
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rs290427
chr20:54057290
G
>
A
Sequence
aggctgtgcacatttggggaaaag[G/A]aatatatgaaatatcgctggagac
ASB in cell types
HepG2 (hepatoblastoma)
GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
RBM25_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN
-4.99
2.69
1.00
7.2·10
-4
1.75
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
eye color
,
ldl cholesterol
,
microalbuminuria
,
tetrology of fallot
,
total cholesterol
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)