rs292118 chr20:54251957 C>T

Sequence
gcctcaagtcacacatgtactaaa[C/T]ggttagagctcagatttgaacccc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
MNT_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN n/a 2.32 1.000.02 6.00 n/a No Hit
FOXA1_HUMAN n/a 2.68 1.000.03 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol parkinsons disease (pd)
GTEx eQTL Adipose_Subcutaneous Esophagus_Muscularis

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