rs292567 chr7:135190837 A>G

Sequence
agaatgcagcaaagtgaaacaaaa[A/G]agaggaagaggcaagttctaacac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages)
ASB for transcription factors
IKZF2_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 3.62 -2.57 8.9·10-81.00 1.00 n/a n/a
IKZF1_HUMAN 3.08 -0.04 3.0·10-50.82 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adrenal_Gland Artery_Tibial Esophagus_Mucosa Liver Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid

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