ADASTRA v6.1.0
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rs292567
chr7:135190837
A
>
G
Sequence
agaatgcagcaaagtgaaacaaaa[A/G]agaggaagaggcaagttctaacac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
MDM(monocyte derived macrophages)
ASB for transcription factors
IKZF2_HUMAN
IKZF1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN
3.62
-2.57
8.9·10
-8
1.00
1.00
n/a
n/a
IKZF1_HUMAN
3.08
-0.04
3.0·10
-5
0.82
1.50
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Tibial
,
Esophagus_Mucosa
,
Liver
,
Lung
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Stomach
,
Testis
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)