rs29518 chr7:41178505 G>A
- Sequence
ttttgggtggtgaaatgtcattga[G/A]attaaaaagaaaaacacagtgttc
- ASB in cell types
- LNCaP (prostate carcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.16 | -0.20 | 1.51 | n/a | No Hit | |||
| ANDR_HUMAN | 1.16 | -0.14 | 1.46 | 0.64 | Weak Discordant |
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Motif analysis
