rs29546 chr5:133423942 G>A
- Sequence
cgcacgtgagctggagcccagcat[G/A]gagctgaggaacagcgctggggtc
- ASB in cell types
- A549 (lung carcinoma) hepatocytes esophagus muscularis mucosa
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| A549 (lung carcinoma) | 0.97 | 0.33 | 2.00 | |||
| hepatocytes | -0.72 | 1.25 | 1.00 | |||
| esophagus muscularis mucosa | -0.78 | 1.31 | 1.00 |
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