rs296728 chr9:90985477 G>T
- Sequence
gagatctgaacctttctctagata[G/T]tcatacatactggacaaatagggc
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19099 (female B-cells Lymphoblastoid Cell Lines) MCF7 (Invasive ductal breast carcinoma) HMEC (human mammary epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.92 | 1.04 | 1.52 | n/a | No Hit |
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