rs300815 chr10:30605667 G>A
- Sequence
ggggtcagaagtgcagcctcagcc[G/A]atgacagcagcctggcctggcccg
- ASB in cell types
- liver CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- RXRA_HUMAN HNF4A_HUMAN FOXA2_HUMAN SP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | 3.56 | -3.55 | 1.00 | n/a | No Hit | |||
| HNF4A_HUMAN | 2.56 | 0.11 | 1.25 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.61 | -0.36 | 1.25 | n/a | No Hit | |||
| SP1_HUMAN | 2.42 | -2.08 | 1.00 | n/a | No Hit | |||
| MAX_HUMAN | 1.99 | -1.31 | 1.25 | n/a | No Hit |
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