rs300917 chr4:143348696 C>G

Sequence
ttccatagctcgaagctgttctgc[C/G]gcgctcttttgctcttcggagtgc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN n/a 0.79 1.000.03 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder),  hdl cholesterol,  height,  hypertension,  serum creatinine
GTEx eQTL Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Esophagus_Mucosa,  Testis,  Whole_Blood

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