rs30192 chr5:76074772 A>C
- Sequence
ttcttcccttttgcttgttaagat[A/C]ctgaagccattctgactttaggca
- ASB in cell types
- GM10847 (female B-cells Lymphoblastoid Cell Lines) Peyer's patch T-ALL cells from peripheral blood 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.99 | 0.55 | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | 1.87 | 0.54 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2