ADASTRA v6.1.0
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rs303995
chr19:55913864
G
>
A
Sequence
gcctgaccagctcagcaccccaaa[G/A]acaccttctagccagtagaggggg
ASB in cell types
MS-1 (Small cell lung carcinoma)
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MS-1 (Small cell lung carcinoma)
n/a
1.30
1.00
1.2·10
-5
1.33
22RV1 (prostate carcinoma)
1.78
0.72
0.01
1.00
1.56
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
mitral annular calcium
,
parkinsons disease
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale