rs306588 chr10:30434664 G>A
- Sequence
cagggcagtgctggtctgggcagt[G/A]cgcggggaagcggggacccgctgt
- ASB in cell types
- K562 (myelogenous leukemia) keratinocytes GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma)
- ASB for transcription factors
- SNAI2_HUMAN TYY1_HUMAN NRF1_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | n/a | 3.59 | 1.50 | n/a | No Hit | |||
| TYY1_HUMAN | -3.17 | 2.69 | 1.00 | n/a | No Hit | |||
| NRF1_HUMAN | 1.29 | -0.46 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 0.16 | 1.64 | 1.50 | n/a | n/a | |||
| FOXK2_HUMAN | -4.69 | 2.71 | 1.50 | n/a | No Hit |
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