ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs307748
chr8:141154347
C
>
T
Sequence
catatctcaaatattccagggcta[C/T]gcggtctcttagcccaggcccctg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
HAEC (human aortic endothelial cells)
MDA-MB-231 (breast adenocarcinoma)
breast tumor xenograft
ASB for transcription factors
TF65_HUMAN
JUN_HUMAN
SUH_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN
0.48
2.38
1.00
6.5·10
-8
3.00
n/a
No Hit
JUN_HUMAN
0.31
1.00
1.00
2.7·10
-3
1.94
n/a
No Hit
SUH_HUMAN
-1.74
2.67
1.00
0.05
2.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
asthma
,
bipolar disorder
,
height
,
ldl cholesterol
,
maternal transmission distortion
,
premature ovarian failure
,
transmission distortion
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)