rs309843 chr8:29991150 C>T
- Sequence
gaagagaaccgaatgtcaagttgg[C/T]aaaaagagatgagctaataggctt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) monocytes from periferal blood
- ASB for transcription factors
- SRBP2_HUMAN IKZF1_HUMAN NFAC3_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 2.29 | n/a | 2.50 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.74 | 1.23 | 1.00 | n/a | n/a | |||
| NFAC3_HUMAN | -2.24 | 2.67 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.76 | 0.95 | 1.00 | n/a | n/a | |||
| HTF4_HUMAN | -2.06 | 2.33 | 1.00 | n/a | No Hit |
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