ADASTRA v6.1.0
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rs309914
chr5:43007507
T
>
C
Sequence
actgctcaggagaagctgcaggct[T/C]gacccaccagaggtgctgccaccg
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia)
22RV1 (prostate carcinoma)
ASB for transcription factors
SPT5H_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPT5H_HUMAN
-0.74
1.55
1.00
0.02
1.33
n/a
n/a
ANDR_HUMAN
-1.12
2.19
1.00
0.03
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
triglycerides
,
triglycerides change with statins
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Spleen
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)