rs310132 chr1:153122891 C>T

Sequence
ggaaagaccacagacagaaggaaa[C/T]ttccagctgaactttgtaacaatt
ASB in cell types
ICN12 (primary pre-B acute lymphomablastic leukemia) MM1.S (plasma cell myeloma)
ASB for transcription factors
PBX1_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX1_HUMAN 3.14 -5.21 2.5·10-41.00 1.50 n/a No Hit
IKZF1_HUMAN 2.08 n/a 9.2·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease fasting blood glucose triglycerides
GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Vagina

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