rs3101339 chr1:72282986 A>C
- Sequence
acagcagcagcagaagcagcgcgg[A/C]gcgctgcgccggccgccggctccc
- ASB in cell types
- BEAS-2B (bronchial epithelium) HEK293 (embryonic kidney)
- ASB for transcription factors
- ZBT44_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT44_HUMAN | n/a | 0.79 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | -0.10 | 1.02 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Lung