ADASTRA v6.1.0
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rs310220
chr1:64848883
T
>
C
Sequence
atttgcacaaatgccaccatttgt[T/C]atctgtcagagccgaatggcgatg
ASB in cell types
MKL-1 (Merkel cell carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MKL-1 (Merkel cell carcinoma)
-0.26
1.82
1.00
6.9·10
-3
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
parkinsons disease
GTEx eQTL
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
,
Colon_Transverse
,
Lung
,
Spleen
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
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