rs3103909 chr1:182030105 T>G
- Sequence
cgccgcccccttgtggtctcggcc[T/G]gcgggcagccctttggagcgcgcg
- ASB in cell types
- esophagus squamous epithelium pre- leukemia stem cells (CD34+ human cord blood cells) 22RV1 (prostate carcinoma) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN ILF3_HUMAN FOXO1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.53 | 1.22 | 1.42 | n/a | No Hit | |||
| ILF3_HUMAN | n/a | 3.40 | 3.00 | n/a | n/a | |||
| FOXO1_HUMAN | 2.61 | -2.35 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.37 | -4.60 | 2.00 | n/a | No Hit |
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