ADASTRA v6.1.0
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rs311358
chr19:46860134
A
>
G
Sequence
tggctgcagattttcttcacagcc[A/G]ggagaaagagcacgcgctctccag
ASB in cell types
HEK293 (embryonic kidney)
MOLT-4 (Adult T acute lymphoblastic leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ZN629_HUMAN
SPT5H_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN629_HUMAN
2.49
-2.03
0.02
1.00
1.00
n/a
n/a
SPT5H_HUMAN
1.05
-0.57
0.03
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
triglycerides change with statins
GTEx eQTL
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)