rs311434 chr1:24990794 A>G

Sequence
caccatcaacttggctttcatccc[A/G]tcagcttccaccctctgtgaaaga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFIC_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFIC_HUMAN 2.94 -3.02 2.4·10-31.00 1.00 -1.16 Weak Concordant
COT1_HUMAN 2.46 -2.49 0.011.00 1.00 n/a No Hit
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Motif analysis

NFIC_HUMAN Weak Concordant
NFIC_HUMAN pic

Genetic associations

No data available

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