rs312172 chr12:104740843 A>G
- Sequence
cctaagaagccgcagagatgtctg[A/G]cttcctcagtgaacagcagatgga
- ASB in cell types
- monocyte-derived dendritic cells THP-1 (acute monocytic leukemia) MDM(monocyte derived macrophages) macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.27 | -0.48 | 1.43 | -1.31 | Weak Concordant | |||
| STAT1_HUMAN | 3.05 | n/a | 3.00 | n/a | No Hit | |||
| CDK9_HUMAN | 1.26 | -0.68 | 1.00 | n/a | n/a |
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Motif analysis
