rs3128112 chr1:997238 C>G

Sequence
gatggacgacaagttaggaggaaa[C/G]aagggggaaaagccagggggcagg
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN189_HUMAN ZN398_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN189_HUMAN -4.99 2.91 1.000.02 2.00 0.81 Weak Concordant
ZN398_HUMAN n/a 2.30 1.000.03 2.00 n/a n/a
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Motif analysis

ZN189_HUMAN Weak Concordant
ZN189_HUMAN pic

Genetic associations

GTEx eQTL Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Stomach,  Thyroid,  Whole_Blood

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