rs313324 chr12:104583032 A>C

Sequence
acagctttttaatttgcctgcaca[A/C]atagacctgcctggccaacttgga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells
ASB for transcription factors
SMCA5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA5_HUMAN -1.83 2.22 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol microalbuminuria obesity with early age of onset (age >2)
GTEx eQTL Colon_Sigmoid Heart_Left_Ventricle

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