rs313327 chr12:104580243 C>T
- Sequence
agatttcaggcttgagctggagta[C/T]gaaaggaaattgaaactaaagatt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN RUNX3_HUMAN HTF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | n/a | 2.94 | 2.00 | 3.33 | Concordant | |||
| RUNX3_HUMAN | 1.80 | -1.50 | 1.00 | n/a | No Hit | |||
| HTF4_HUMAN | 2.30 | -1.98 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
