rs314073 chr4:188373111 T>C
- Sequence
tggccacatggagcatgtgtatct[T/C]ggagaagaacattgctgacctctg
- ASB in cell types
- A549 (lung carcinoma) HeLa Kyoto (cervical adenocarcinoma) HCT-116 (colon carcinoma) H929 (plasma cell myeloma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN PMEPA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.41 | 0.69 | 1.27 | n/a | No Hit | |||
| RAD21_HUMAN | 2.18 | -0.08 | 1.26 | n/a | n/a | |||
| SMC3_HUMAN | 2.19 | -0.39 | 1.00 | n/a | n/a | |||
| PMEPA_HUMAN | 2.59 | -2.32 | 1.00 | n/a | n/a | |||
| STAG2_HUMAN | 2.46 | -2.55 | 1.00 | n/a | n/a |
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