rs316211 chr5:97046489 C>T
- Sequence
ggagaagaaagggtgtttgttgag[C/T]gttactgccaccacatgttgatgg
- ASB in cell types
- EOL-1 (Acute myeloid leukemia) GM18526 (B – cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 3.10 | -1.15 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.41 | -0.03 | 1.46 | n/a | No Hit | |||
| RAD21_HUMAN | 2.14 | -0.22 | 1.83 | n/a | n/a |
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