rs316398 chr5:43037924 G>A

Sequence
aatatcgctgtcaggcctatatca[G/A]tatctgctcggtctcaccaggact
ASB in cell types
adult erythroblasts Th1-cells
ASB for transcription factors
RBBP5_HUMAN TBX21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN n/a 3.34 1.004.8·10-4 2.00 n/a n/a
TBX21_HUMAN n/a 2.30 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hypertension (early onset hypertension),  microalbuminuria,  rheumatoid arthritis,  schizophrenia,  tetrology of fallot,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Colon_Transverse,  Lung,  Nerve_Tibial,  Pituitary,  Prostate,  Whole_Blood

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