ADASTRA v6.1.0
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rs318443
chr6:2926064
A
>
T
Sequence
taggccagatttatctttcacttt[A/T]cataaacatctcagtgtagcaaag
ASB in cell types
embryonic stem cells derived definitive endoderm
definitive endoderm from HUES8
WA09 (embryonic stem cells)
ASB for transcription factors
GATA6_HUMAN
AP2A_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA6_HUMAN
1.30
0.13
7.3·10
-3
1.00
1.11
n/a
No Hit
AP2A_HUMAN
2.38
-2.07
0.03
1.00
1.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
childhood acute lymphoblastic leukemia
,
neuroticism
,
salmonella-induced pyroptosis
,
triglycerides
GTEx eQTL
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)