ADASTRA v6.1.0
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rs318490
chr6:2898066
G
>
T
Sequence
ctccagcctgggtgacagagcaga[G/T]actctatctcaaaaaacaaaacaa
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ARI1B_HUMAN
IKZF1_HUMAN
NFIC_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ARI1B_HUMAN
n/a
1.74
1.00
4.9·10
-3
3.00
n/a
n/a
IKZF1_HUMAN
n/a
3.23
1.00
6.5·10
-3
3.00
n/a
n/a
NFIC_HUMAN
n/a
2.60
1.00
0.03
3.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Breast_Mammary_Tissue
,
Esophagus_Muscularis
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)