rs324639 chr7:137003903 G>A

Sequence
catgagatctgatgatttgataag[G/A]ggcttttccccttttgctcggcac
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) embryonic stem cells derived definitive endoderm
ASB for transcription factors
SPI1_HUMAN GATA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 0.57 1.07 1.000.02 1.00 n/a No Hit
GATA4_HUMAN 2.37 0.26 0.031.00 1.00 0.06 Weak Discordant
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Motif analysis

GATA4_HUMAN Weak Discordant
GATA4_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Colon_Sigmoid Testis

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