rs326049 chr5:997102 G>C
- Sequence
tggactggttctagctggtgtaga[G/C]gctgcacacaggatgcctctgtgt
- ASB for transcription factors
- ZSC29_HUMAN NR2C1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSC29_HUMAN | -4.10 | 3.78 | 1.00 | 4.83 | Concordant | |||
| NR2C1_HUMAN | 1.94 | -0.68 | 1.50 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Testis