rs329117 chr5:134524410 T>C
- Sequence
ccagaaactgcgaggatccgagcg[T/C]actgtttgtgcaccacaaggtcaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma) gastroesophageal sphincter CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN EP300_HUMAN SMC3_HUMAN JUN_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -1.34 | 2.04 | 1.50 | n/a | No Hit | |||
| EP300_HUMAN | 1.60 | 1.41 | 1.38 | n/a | n/a | |||
| SMC3_HUMAN | 1.19 | -0.11 | 2.00 | n/a | n/a | |||
| JUN_HUMAN | 1.02 | 0.04 | 2.00 | n/a | No Hit |
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