ADASTRA v6.1.0
Search
Browse
Annotate
Help
Downloads
About
rs329120
chr5:134526066
C
>
T
Sequence
gcgcatctccacgacgttatttgg[C/T]gtttttgcaacagatctgccagcg
ASB in cell types
HS-ES-2M (Epithelioid sarcoma)
HCT-116 (colon carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HS-ES-2M (Epithelioid sarcoma)
-0.93
1.39
1.00
0.03
1.00
HCT-116 (colon carcinoma)
0.98
0.15
0.04
0.94
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
EMBL-EBI
body mass index
,
educational attainment (years of education)
,
hand grip strength
,
smoking cessation (mtag)
GRASP
birth weight
,
ldl cholesterol change with statins
,
microalbuminuria
,
rheumatoid arthritis
,
serum creatinine
,
total cholesterol change with statins
GTEx eQTL
Cells_Cultured_fibroblasts
Download
Download page in JSON
Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale