rs329317 chr5:134568124 T>C
- Sequence
ctctgttctgtgctggtcagccca[T/C]gtgtctgtccctggctgggttgtc
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.31 | 1.40 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP eye color, prop taste detection threshold, resistance to kuru in aged women despite likely exposure, rheumatoid arthritis, total cholesterol, tourettes syndrome, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid