rs330124 chr6:8556746 G>T

Sequence
ttcagttattttttaagaccatta[G/T]gttggtgttgtttatggcaaagtg
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.82 -5.34 0.011.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  height,  obesity with early age of onset (age >2),  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Cerebellum,  Breast_Mammary_Tissue,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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