rs33027 chr5:14180634 G>C
- Sequence
gatcgcttgaggccaggaatttga[G/C]actagtctgggcaacatagcaaga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SMCE1_HUMAN PKNX1_HUMAN SIX4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCE1_HUMAN | n/a | 3.33 | 2.00 | n/a | n/a | |||
| PKNX1_HUMAN | n/a | 2.34 | 2.00 | 4.39 | Concordant | |||
| SIX4_HUMAN | n/a | 3.06 | 3.00 | 0.87 | Weak Concordant |
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Motif analysis
