rs331571 chr5:95152719 A>C
- Sequence
atttacattcttatgtttgtgtgg[A/C]gtttgctgaaggggaataaattta
- ASB in cell types
- 22RV1 (prostate carcinoma) VCaP (prostate carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.14 | 2.92 | 1.83 | -2.06 | Discordant | |||
| FOXA1_HUMAN | -0.12 | 1.74 | 2.62 | 0.71 | Weak Concordant |
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Motif analysis
