rs331984 chr13:109687757 A>G

Sequence
gctctgggcagggtttgctcttta[A/G]ccctcctagaactaattggtccac
ASB in cell types
SNU-16 (Gastric adenocarcinoma)
ASB for transcription factors
HNF4A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.66 n/a 9.0·10-31.00 1.33 -0.03 Weak Concordant
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Motif analysis

HNF4A_HUMAN Weak Concordant
HNF4A_HUMAN pic

Genetic associations

GRASP hypertension (early onset hypertension),  refractive error,  salmonella-induced pyroptosis,  triglycerides

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