ADASTRA v6.1.0
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rs333311
chr3:124620903
A
>
G
Sequence
ctttcattttatcctctgcttcca[A/G]tgccatcctaacaggagccaaagc
ASB in cell types
GM19239 (male B-cells lymphoblastoid cell line)
GM02610 (Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
-3.95
3.63
1.00
1.2·10
-6
1.00
n/a
n/a
CTCF_HUMAN
-0.13
3.21
0.90
1.2·10
-3
2.78
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Mucosa
,
Liver
,
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)