ADASTRA v6.1.0
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rs334125
chr2:178194197
T
>
G
Sequence
cggatggcaactcggggtttccac[T/G]gcgggtgatctcgggacaccacgg
ASB in cell types
G401 (rhabdoid tumor of the kidney)
22RV1 (prostate carcinoma)
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN
-0.12
0.88
1.00
0.03
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Colon_Transverse
,
Esophagus_Mucosa
,
Liver
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)